Kangquan Yin*, Mi Yoon Chung, Bo Lan, Fang Du*, Myong Gi Chung (2024). Plant conservation in the age of genome editing: opportunities and challenges. Genome Biology, 25(1), 279.
Yi Zhang, Renyi Ma, Jian Yang, Yuqing Jing, Kangquan Yin*, Min Deng*, Fang Du* (2024). First report of powdery mildew of Quercus guyavifolia (Fagaceae) caused by Erysiphe quercicola. Plant Disease, 108(6), 1894.
Min Qi, Fang Du*, Fei Guo, Kangquan Yin, Jijun Tang (2024). Species identification through deep learning and geometrical morphology in oaks (Quercus spp.): Pros and cons. Ecology and Evolution, 14(2), e11032.
Fang Du* (2023). Conservation of genetic diversity, the fundamental for integrity and authenticity of terrestrial natural ecosystems in national parks. National park, 1(1), 27-33. (Chinese with English Abstract)
Xi Chen*, Yanjun Luo, Rong Wang, Fang Du* (2023). The distinct fruit size and physical defense promote divergent secondary seed dispersal strategies of three oak species. Forest Ecology and Management, 529, 120642.
Fang Du*, Min Qi, Yuan-Ye Zhang, Remy J. Petit (2022). Asymmetric character displacement in mixed oak stands. New Phytologist, 236(3), 1212-1224. (Cover story) 
Lin Yang, Kangquan Yin*, Fang Du* (2022). Cloning of QaGDU3 gene from Quercus aquifolioides Rehd. et Wils. and its genetic transformation into Arabidopsis thaliana ( L.) Heynh. Plant Science Journal, 40(4) : 524-532. (Chinese with English Abstract)
Keke Liu, Min Qi, Fang Du* (2022). Population and landscape genetics provide insights into species conservation of two evergreen oaks in Qinghai–Tibet Plateau and adjacent regions. Frontiers in Plant Science, 13.
Li Feng*, Fang Du* (2022). Landscape genomics in tree conservation under a changing environment. Frontiers in Plant Science, 13.
Yuejuan Li, Yuanye Zhang, Pei-Chun Liao, Tianrui Wang, Xuanying Wang, Saneyoshi Ueno, Fang Du* (2021). Genetic, geographic and climatic factors jointly shape leaf morphology of an alpine oak, Quercus aquifolioides Rehder & E.H. Wilson. Annals of Forest Science, 78(3), 64.
Wei Su, Yigang Song, Min Qi, Fang Du* (2021). Leaf character variation of section Quercus based on Geometric Morphological Analysis. Chinese Journal of Applied Ecology, 1-8. (Chinese with English Abstract)
Min Qi, Yuanye Zhang, Jiawei Li, Fang Du* (2021). Genetic diversity and differentiation study of Quercus dentata with regards to its distribution in China and Japan. Journal of Lanzhou University (Natural Sciences), 57(5), 720-726. (Chinese with English Abstract)
Tianrui Wang, Li Feng, Fang Du* (2020). New approaches for ecological adaptation study: from population genetics to landscape genomics. Scientia Sinica(Vitae), 51(02):167-178. (Chinese with English Abstract)
※The paper was translated into English by Prof. Myong Gi Chung ( E-mail: mgchung@gnu.ac.kr) on 22 March 2023, Myong Gi Chung and Fang Du finally edited the English version on 27 April 2023. New approaches for ecological adaptation study: from population genetics to landscape genomics. Scientia Sinica(Vitae), 51(02):167-178. (English with Korean Abstract)
Fang Du*, Tianrui Wang, Yuyao Wang, Saneyoshi Ueno, Guillaume de Lafontaine (2020). Contrasted patterns of local adaptation to climate change across the range of an evergreen oak, Quercus aquifolioides. Evolutionary Applications, 13(9): 2377-2391.
Yang Xu, Hao Chen, Min Qi, Wei Su, Fang Du* (2019). The complete chloroplast genome of Quercus fabri (fagaceae) from china. Mitochondrial DNA Part B, 4(2):2857-2858.
Yuan Liu，Yuejuan Li，Jialin Song，Ruipu Zhang，Yu Yan, Yuyao Wang, Fang Du* (2018). Geometric morphometric analyses of leaf shapes in two sympatric Chinese oaks: Quercus dentata thunberg and Quercus aliena blume (fagaceae). Annals of Forest Science, 75(4).
Yuyao Wang, Yue Zhang, Jianhuo Fang, Fang Du* (2018). A research method for ecological adaptation of tree species based on candidate genes: with Quercus aquifolioides as an example. Journal of Lanzhou University: Natural Sciences, 054(006): 811-816. (Chinese with English Abstract)
Kangquan Yin, Yue Zhang, Yuejuan Li, Fang Du* (2018). Different natural selection pressures on the atpf gene in evergreen sclerophyllous and deciduous oak species: evidence from comparative analysis of the complete chloroplast genome of Quercus aquifolioides with other oak species. International Journal of Molecular Sciences, 19(4): 1042.
Jia Lyu, Jia Song, Yuan Liu, Yuyao Wang, Junqing Li, Fang Du* (2018). Species Boundaries Between Three Sympatric Oak Species: Quercus aliena, Q. dentata, and Q. variabilis at the Northern Edge of Their Distribution in China. Front. Plant Sci, 9:414.
Yuan Liu, Jia Lv, Jia Song, Yuyao Wang, Xiaojing Wang, Fang Du* (2017). Plant species delimitation method based on geometric morphometrics. Plant Science Journal, 35(6). (Chinese with English Abstract)
Fang Du* , Meng Hou, Wenting Wang, Kangshan Mao, Arndt Hampe (2017). Phylogeography of Quercus aquifolioides provides novel insights into the neogene history of a major global hotspot of plant diversity 
in south‐west china. Journal of Biogeography, 44(2): 294-307. (Cover story)
Jia Song, Meng Hou, Sihai Lu, Junqing Li, Fang Du* (2015). Geometric morphological analysis of leaves based on landmarks. Journal of Lanzhou University (Natural Sciences), 51(5). (Chinese with English Abstract)
Sihai Lu, Meng Hou. Fang Du*, Junqing Li, Kangquan Yin* (2015). Complete chloroplast genome of the Oriental white oak: Quercus aliena Blume. Mitochondrial DNA Part A, 27(4): 2802-2804.
Fang Du*, Tiange Lang, Sihai Lu, Yuyao Wang, Junqing Li, Kangquan Yin (2015). An improved method for chloroplast genome sequencing in non-model forest tree species. Tree Genetics & Genomes, 11: 114.
*Indicate correspondence author Fang Du (Fang K. Du in publication, as suggested by her Ph D. supervisor Rémy J. Petit)
Master thesis
Wei Qin (2024). Adaptive introgression of Quercus aquifolioides and Quercus spinosa based on whole-genome resequencing. 基于全基因组重测序的川滇高山栎和刺叶高山栎适应性渐渗研究. Beijing Forestry University.
Mingxing Yuan (2024). Chloroplast genome function on evergreen and deciduous oaks. 常绿和落叶栎类叶绿体基因功能研究. Beijing Forestry University.
Keke Liu (2022). Ecological adaptation study of Quercus aquifolioides and Quercus spinosa based on whole-genome resequencing. 基于全基因组重测序的川滇高山栎和刺叶高山栎生态适应研究 . Beijing Forestry University.
Lin Yang (2022). Study on the ecological function of QaGDU3 gene in an alpine oak (Quercus aquifolioides Rehd. Et Wils.) . 川滇高山栎 QaGDU3 基因生态功能研究 . Beijing Forestry University.
Yixin Kang (2022). Species distribution of white oaks in East Asia under climate change and population genetics study of Quercus serrata. 气候变化下东亚栎属白栎组物种分布及枹栎的种群遗传学研究. Beijing Forestry University.
Yang Xu (2021). Comparation of chloroplast genomes of different leaf habit oak species. 不同叶习性栎属物种间的叶绿体基因组比较研究. Beijing Forestry University.
Min Qi (2021). Study of Population and Landscape Genetics of Two Deciduous Oak. 两种落叶栎种群遗传学和景观遗传学研究. Beijing Forestry University.
Wei Su (2021). Leaf morphology analysis based on geometric morphometric analyses (GMMs) and deep learning in oaks. 基于几何形态和深度学习的栎类叶片形态研究. Beijing Forestry University.
Tianrui Wang (2020). Population and Landscape Genetic Study of Quercus aquifolioides Rehd. Et Wils. and Quercus spinosa David ex Franch. Based on Microsatellite Molecular Markers. 基于微卫星分子标记的川滇和刺叶高山栎的种群和景观遗传学研究. Beijing Forestry University.
Yuejuan Li (2020). Study on the variation in leaf morphology of Quercus aquifolioides Rehd. Et Wils. and Quercus spinosa David ex Franch. using geometric morphometric methods. 通过几何形态学方法研究川滇高山栎和刺叶高山栎的叶片形态变异. Beijing Forestry University.
Yuan Liu (2018). Morphological variation and population genetic research in two sympatric Quercus. 同域分布栎属两近缘种形态变异与种群遗传研究. Beijing Forestry University.
Yuyao Wang (2018). Study on ecological adaptation based on drought and hypoxia related candidate genes in trees: Quercus aquifoliodes Rehd. Et Wils. 基于干旱及缺氧候选基因的生态适应研究: 以川滇高山栎为例. Beijing Forestry University.